STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0459Putative succinyl-CoA:3-ketoacid-CoA ligase, subunit A. (280 aa)    
Predicted Functional Partners:
ASAC_0460
Putative succinyl-CoA:3-ketoacid-CoA ligase, subunit B.
 
 0.999
ASAC_0457
DUF429 domain containing protein.
       0.572
aspS
Aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp).
       0.572
ASAC_1031
3-Hydroxyacyl-CoA dehydrogenase.
  
  
 0.546
ASAC_1436
Citryl-CoA lyase beta subunit-like protein.
     
 0.474
ASAC_0456
Phosphoesterase, DHH family.
       0.467
ASAC_0931
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase.
  
  
 0.467
ASAC_0927
Gluconate dehydratase (GAD).
 
  
 0.466
ASAC_0176
Enoyl-CoA hydratase.
  
  
 0.459
ASAC_1261
Putative 3-ketoacyl-CoA thiolase.
  
  
 0.459
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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