STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0500Putative ABC transporter, permease protein. (329 aa)    
Predicted Functional Partners:
ASAC_0499
Putative ABC transporter, ATP binding protein.
 
 0.999
ASAC_0501
Putative ABC transporter, substrate binding protein.
 
 
 0.995
ASAC_1076
ABC transporter, substrate binding protein.
 
 
 0.971
ASAC_0498
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.701
ASAC_0502
Putative translation initiation factor eIF-2B subunit; Belongs to the eIF-2B alpha/beta/delta subunits family.
       0.583
ASAC_0503
Hypothetical protein.
       0.534
ASAC_1202
Uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.483
ASAC_1079
Transport system kinase.
  
  
 0.473
cobS
Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
  
  
 0.460
ASAC_0144
Threonine-phosphate decarboxylase.
  
  
 0.454
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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