STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0537Fumarate hydratase. (440 aa)    
Predicted Functional Partners:
ASAC_1443
Succinate:quinone oxidoreductase, flavoprotein subunit A.
 
 0.999
ASAC_0288
Putative L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.987
ASAC_1440
Succinate:quinone oxidoreductase, iron-sulfur subunit B.
  
 0.987
ASAC_1442
Succinate:quinone oxidoreductase, cytochrome b subunit C.
  
 
 0.980
ASAC_1277
Fumarase (fumarate hydratase) class I, N-terminal domain protein.
  
 
 0.972
ASAC_1278
Fumarase (fumarate hydratase) class I, C-terminal domain protein.
  
 
 0.972
ASAC_0512
Malate dehydrogenase.
  
 
 0.955
ASAC_0978
Malate dehydrogenase.
  
 
 0.955
ASAC_1441
Succinate:quinone oxidoreductase, hydrophobic anchor subunit D.
  
 
 0.935
ASAC_0567
Fumarylacetoacetate hydrolase family protein.
  
 0.879
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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