STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0542Putative HTH-type transcriptional regulator. (245 aa)    
Predicted Functional Partners:
ASAC_1035
Putative hydroxymethylglutaryl-CoA synthase; Belongs to the thiolase-like superfamily. UPF0219 family.
  
    0.836
ASAC_1037
Predicted nucleic-acid-binding protein containing a Zn-ribbon.
  
    0.708
ASAC_0585
Hypothetical protein.
  
     0.649
ASAC_0214
DUF373 domain containing protein.
 
     0.625
ASAC_0026
Putative 3-ketoacyl-CoA thiolase.
  
    0.624
ASAC_1036
Putative 3-ketoacyl-CoA thiolase.
  
    0.624
ASAC_1264
DUF35 domain containing protein.
 
    0.602
ASAC_0462
Hypothetical protein.
  
     0.553
carS
Hypothetical protein; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
  
     0.551
ASAC_0321
Putative 3-ketoacyl-CoA thiolase.
  
    0.546
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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