Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0562Hypothetical protein. (280 aa)    
Predicted Functional Partners:
ASAC_0559
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.841
ASAC_0560
Polysaccharide deacetylase.
  
  
 0.839
ASAC_0561
N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein.
  
  
 0.818
ASAC_0195
Dolichol-phosphate mannosyltransferase.
  
  
 0.661
ASAC_0563
3-oxoacyl-[acyl-carrier-protein] reductase.
     
 0.564
ASAC_0564
Predicted permease.
       0.491
ASAC_1274
Phosphomethylpyrimidine kinase.
  
    0.439
ASAC_0565
myo-Inositol-3-phosphate synthase.
       0.408
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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