STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (618 aa)    
Predicted Functional Partners:
ASAC_0572
Histidine ammonia-lyase.
 
 0.999
ASAC_0571
Imidazolonepropionase.
 
 0.998
ASAC_0704
Amidohydrolase.
  
  
 0.877
ASAC_0573
Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
  
  
 0.659
ASAC_0138
Agmatinase; Belongs to the arginase family.
  
  
 0.580
ASAC_0767
Hypothetical protein.
  
  
 0.540
ASAC_0574
Amino acid permease.
     
 0.479
ASAC_1025
2-methylcitrate dehydratase.
   
    0.455
ASAC_0576
Predicted exporter of RND superfamily.
       0.428
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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