STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0598GPR1/FUN34/yaaH family protein. (187 aa)    
Predicted Functional Partners:
ASAC_0597
Acyl-CoA ligase (acyl-CoA synthetase).
  
  
 0.886
ASAC_0539
Acyl-CoA ligase (acyl-CoA synthetase).
  
  
 0.515
ASAC_0997
Acyl-CoA ligase (acyl-CoA synthetase).
  
  
 0.515
ASAC_1260
Acyl-CoA ligase (acyl-CoA synthetase).
  
  
 0.515
ASAC_0596
Predicted metal-dependent hydrolase of the TIM-barrel fold family.
       0.512
ASAC_0599
N-acetyltransferase.
       0.479
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
    0.420
ASAC_0600
N-type ATP pyrophosphatase superfamily.
       0.411
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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