Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ASAC_0607ABC transporter, permease. (600 aa)    
Predicted Functional Partners:
ASAC_0088
Maltose/trehalose/maltodextrin ABC-transporter, extracellular substrate-binding protein.
 
 
 0.934
ASAC_0983
Arabinose ABC transporter, permease.
 
 
0.900
ASAC_0086
Sugar ABC transporter, permease protein.
 
 
0.899
ASAC_0981
ABC-type sugar transport system, periplasmic component.
 
 
 0.847
ASAC_0723
Sugar-binding periplasmic protein.
 
 
 0.846
ASAC_0643
Sugar-binding periplasmic protein.
 
 
 0.839
ASAC_0857
ABC Transporter.
  
 
 0.774
ASAC_0085
Sugar ABC transporter, ATP-binding protein.
 
   
 0.707
ASAC_0982
Arabinose ABC transporter, permease.
  
     0.698
ASAC_0984
Arabinose ABC transporter, ATP-binding protein.
 
   
 0.602
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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