Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ASAC_0679Hypothetical protein. (45 aa)    
Predicted Functional Partners:
ASAC_1075
Glycogen phosphorylase.
  
 
 0.591
ASAC_0680
Glycosyl transferase family 2.
  
  
 0.587
ASAC_0657
Polysaccharide biosynthesis protein.
  
  
 0.520
ASAC_0658
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.489
ASAC_0660
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.465
ASAC_0661
DTDP-glucose 4,6-dehydratase.
  
  
 0.465
ASAC_0386
Repair endonuclease XPF.
   
 0.458
ASAC_0551
ATP-dependent helicase.
   
 
 0.404
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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