STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0725ABC transporter related protein. (299 aa)    
Predicted Functional Partners:
ASAC_0726
Hypothetical protein.
  
 
 0.957
ASAC_0476
ABC transporter, ATP binding protein.
 
    
0.905
ASAC_0705
ABC transporter, ATP binding protein.
 
0.668
ASAC_0727
F420-0:gamma-glutamyl ligase.
       0.663
ASAC_0475
ABC-type multidrug transport system ATPase and permease components-like protein.
  
 0.644
ASAC_0724
DedA.
       0.609
ASAC_0870
ABC transporter, permease protein.
  
 0.570
ASAC_0535
ABC-type multidrug transport system, permease component.
  
  
 0.487
ASAC_1374
ABC-2 type transporter.
  
  
 0.481
ASAC_0728
Coproporphyrinogen III oxidase.
     
 0.465
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.