Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ASAC_0840Short chain dehydrogenase. (263 aa)    
Predicted Functional Partners:
ASAC_0958
DNA double-strand break repair protein mre11.
  
 
 0.616
ASAC_1488
Cytochrome b/b6, N-terminal.
 
 
 0.599
ASAC_1332
Predicted hydrolase or acyltransferase (alpha/beta hydrolase superfamily).
  
 0.589
ASAC_0176
Enoyl-CoA hydratase.
  
 0.584
ASAC_1433
Enoyl-CoA hydratase.
  
 0.584
ASAC_0839
Hypothetical protein.
       0.563
ASAC_0885
Uracil-DNA glycosylase.
       0.561
ASAC_0251
Site specific DNA-methyltransferase.
   
 
 0.556
gap
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH).
  
 
 0.530
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 0.523
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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