Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ASAC_0885Uracil-DNA glycosylase. (213 aa)    
Predicted Functional Partners:
ASAC_0896
Uracil-DNA glycosylase.
     
 
0.900
ASAC_0884
Hypothetical protein.
       0.615
ASAC_0196
Phosphoesterase, putative.
     
 0.574
ASAC_0195
Dolichol-phosphate mannosyltransferase.
       0.562
ASAC_0840
Short chain dehydrogenase.
       0.561
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
    0.530
ASAC_0062
Dipeptide/oligopeptide ABC transporter, dipeptide/oligopeptide binding protein.
      
 0.524
tbp
TATA-box-binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
      
 0.524
ASAC_0347
Hypothetical protein.
      
 0.524
ASAC_1322
Predicted EndoIII-related endonuclease.
     
 0.477
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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