Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ASAC_0895Hypothetical protein. (162 aa)    
Predicted Functional Partners:
ASAC_0039
Putative ATP/GTP-binding protein.
   
 0.815
ASAC_0894
2-(5'-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase.
       0.800
ASAC_0896
Uracil-DNA glycosylase.
       0.788
rpl40e
50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
   
  0.743
ASAC_1361
NMD protein affecting ribosome stability and mRNA decay.
   
 
 0.666
cobB
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription; Belongs to the sirtuin family. Class U subfamily.
  
 
 0.658
ASAC_0794
Serine /threonine specific protein phosphatase.
 
 
 
 0.648
ASAC_0288
Putative L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 
 0.626
ASAC_0836
Predicted metalloprotease, containing Jab1/MPN domain.
  
 0.624
ASAC_0609
Putative trehalase.
  
 
 0.619
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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