Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ASAC_0086 | ASAC_0088 | Sugar ABC transporter, permease protein. | Maltose/trehalose/maltodextrin ABC-transporter, extracellular substrate-binding protein. | 0.999 |
ASAC_0086 | ASAC_0898 | Sugar ABC transporter, permease protein. | 4-alpha-glucanotransferase. | 0.737 |
ASAC_0086 | ASAC_1074 | Sugar ABC transporter, permease protein. | Putative glycogen debranching enzyme. | 0.824 |
ASAC_0086 | ASAC_1075 | Sugar ABC transporter, permease protein. | Glycogen phosphorylase. | 0.529 |
ASAC_0088 | ASAC_0086 | Maltose/trehalose/maltodextrin ABC-transporter, extracellular substrate-binding protein. | Sugar ABC transporter, permease protein. | 0.999 |
ASAC_0088 | ASAC_0363 | Maltose/trehalose/maltodextrin ABC-transporter, extracellular substrate-binding protein. | Glycogen synthase. | 0.461 |
ASAC_0088 | ASAC_0898 | Maltose/trehalose/maltodextrin ABC-transporter, extracellular substrate-binding protein. | 4-alpha-glucanotransferase. | 0.793 |
ASAC_0088 | ASAC_1074 | Maltose/trehalose/maltodextrin ABC-transporter, extracellular substrate-binding protein. | Putative glycogen debranching enzyme. | 0.853 |
ASAC_0088 | ASAC_1075 | Maltose/trehalose/maltodextrin ABC-transporter, extracellular substrate-binding protein. | Glycogen phosphorylase. | 0.675 |
ASAC_0305 | ASAC_0334 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | Trehalose synthase. | 0.533 |
ASAC_0305 | ASAC_0363 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | Glycogen synthase. | 0.987 |
ASAC_0305 | ASAC_0747 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain IPhosphomannomutase - Sulfolobus solfataricus; Belongs to the phosphohexose mutase family. | 0.561 |
ASAC_0305 | ASAC_0898 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 4-alpha-glucanotransferase. | 0.666 |
ASAC_0305 | ASAC_1074 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | Putative glycogen debranching enzyme. | 0.735 |
ASAC_0305 | ASAC_1075 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | Glycogen phosphorylase. | 0.961 |
ASAC_0334 | ASAC_0305 | Trehalose synthase. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.533 |
ASAC_0334 | ASAC_0335 | Trehalose synthase. | Glucoamylase. | 0.701 |
ASAC_0334 | ASAC_0362 | Trehalose synthase. | Alpha-amylase. | 0.921 |
ASAC_0334 | ASAC_0363 | Trehalose synthase. | Glycogen synthase. | 0.751 |
ASAC_0334 | ASAC_0898 | Trehalose synthase. | 4-alpha-glucanotransferase. | 0.961 |
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