Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ASAC_0955Bipolar DNA helicase. (518 aa)    
Predicted Functional Partners:
ASAC_0956
5' to 3' nuclease repair protein NurA.
   
 
 0.946
ASAC_0958
DNA double-strand break repair protein mre11.
 
   
 0.911
ASAC_0957
DNA double-strand break repair rad50 ATPase.
 
   
 0.907
ASAC_0954
Predicted archaea-specific methyltransferase.
 
     0.805
ASAC_1503
Hypothetical protein.
   
 
 0.768
ASAC_0251
Site specific DNA-methyltransferase.
       0.561
ASAC_0960
Hypothetical protein.
  
    0.530
ASAC_0959
Hexulose-6-phosphate synthase.
       0.498
infB
Probable translation initiation factor IF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.
   
   0.427
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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