Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ASAC_09565' to 3' nuclease repair protein NurA. (402 aa)    
Predicted Functional Partners:
ASAC_0957
DNA double-strand break repair rad50 ATPase.
     
 0.960
ASAC_0955
Bipolar DNA helicase.
   
 
 0.946
ASAC_0958
DNA double-strand break repair protein mre11.
       0.878
ASAC_1502
Bipolar DNA helicase.
   
 
 0.794
ASAC_0954
Predicted archaea-specific methyltransferase.
       0.763
radA
DNA repair and recombination protein radA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules.
     
 0.649
ASAC_0776
Predicted ATPase.
   
 
 0.582
hjc
Holliday junction resolvase - archaeal type; A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5'-terminal phosphate and a 3'-terminal hydroxyl group that are ligated to produce recombinant products; Belongs to the Holliday junction resolvase Hjc family.
     
 0.566
ASAC_0325
Hypothetical protein.
   
 
 0.554
ASAC_1272
Hypothetical protein.
   
 
 0.554
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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