STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0984Arabinose ABC transporter, ATP-binding protein. (371 aa)    
Predicted Functional Partners:
ASAC_0983
Arabinose ABC transporter, permease.
 
  
 0.981
ASAC_0982
Arabinose ABC transporter, permease.
 
  
 0.980
ASAC_0981
ABC-type sugar transport system, periplasmic component.
 
  
 0.924
ASAC_0807
Dipeptide/oligopeptide ABC transporter, ATPase component.
    
0.905
ASAC_0723
Sugar-binding periplasmic protein.
 
  
 0.848
ASAC_0643
Sugar-binding periplasmic protein.
 
  
 0.845
ASAC_0087
Sugar ABC transporter, permease protein.
 
   
 0.655
ASAC_0607
ABC transporter, permease.
 
   
 0.628
ASAC_0086
Sugar ABC transporter, permease protein.
 
   
 0.552
cysS
Cysteinyl-tRNA synthetase.
 
    0.415
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.