STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_1022RNA (Cytosine-C(5)-)-methyltransferase. (382 aa)    
Predicted Functional Partners:
ASAC_1248
Putative GTP-binding protein; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
 
 
 0.877
ASAC_0186
Hypothetical protein.
  
 
 0.873
ASAC_1305
Putative GTP-binding protein.
   
 
 0.842
ASAC_1313
SnoRNA binding protein.
  
 
 0.836
ASAC_1023
Methyltransferase.
  
  
 0.824
ASAC_1020
Selenocysteine-specific translation elongation factor-like protein.
  
   0.815
rps8e
30S ribosomal protein S8e.
  
 
 0.812
rpl10
LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
  
 
 0.799
ASAC_1021
Glycerate kinase.
       0.780
ASAC_1135
Hypothetical protein; Probably involved in the biogenesis of the ribosome.
  
 
 0.768
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.