STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_1050TatD-related deoxyribonuclease. (291 aa)    
Predicted Functional Partners:
ASAC_0142
Adenosylcobinamide amidohydrolase, putative.
  
     0.551
ASAC_1049
Ribose-5-phosphate isomerase.
       0.544
ASAC_1048
Hypothetical protein.
       0.520
ASAC_1064
Dehydrogenase (flavoprotein)-like protein.
 
    0.505
ASAC_0272
DUF137 domain containing protein.
 
     0.501
ASAC_0886
Hypothetical protein.
  
     0.472
ASAC_1361
NMD protein affecting ribosome stability and mRNA decay.
 
     0.405
trpS
Tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp).
 
     0.404
ASAC_1366
GTPase or GTP-binding protein-like protein.
 
     0.402
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.