STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_1074Putative glycogen debranching enzyme. (683 aa)    
Predicted Functional Partners:
ASAC_0898
4-alpha-glucanotransferase.
 
 0.997
ASAC_0334
Trehalose synthase.
 
 0.992
ASAC_1075
Glycogen phosphorylase.
 
 0.992
ASAC_0335
Glucoamylase.
    
 0.932
ASAC_0362
Alpha-amylase.
    
 0.926
ASAC_0363
Glycogen synthase.
 
  
 0.888
ASAC_0088
Maltose/trehalose/maltodextrin ABC-transporter, extracellular substrate-binding protein.
 
  
 0.853
ASAC_0086
Sugar ABC transporter, permease protein.
 
  
 0.824
ASAC_0079
Probable cationic amino acid permease.
  
 0.800
ASAC_0100
Amino acid permease.
  
 0.800
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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