Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ASAC_1076ABC transporter, substrate binding protein. (276 aa)    
Predicted Functional Partners:
ASAC_0500
Putative ABC transporter, permease protein.
 
 
 0.884
ASAC_0499
Putative ABC transporter, ATP binding protein.
 
 
 0.873
ASAC_1079
Transport system kinase.
  
  
 0.731
ASAC_0501
Putative ABC transporter, substrate binding protein.
  
     0.696
ASAC_0142
Adenosylcobinamide amidohydrolase, putative.
 
  
 0.647
ASAC_1077
Methylmalonyl-CoA mutase, N-terminal domain/subunit.
  
  
 0.640
ASAC_1078
Methylmalonyl-CoA mutase, C-terminal domain/subunit.
  
  
 0.597
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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