Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ASAC_1106Radical SAM domain protein. (286 aa)    
Predicted Functional Partners:
ASAC_1105
Pyruvate-formate lyase-activating enzyme, PflA.
       0.800
ASAC_1104
Transcription elongation factor, S-II like-protein.
       0.534
ASAC_0700
Iron-containing alcohol dehydrogenase.
  
  
 0.529
ASAC_1043
Iron-containing alcohol dehydrogenase.
  
  
 0.529
ASAC_0913
Ferredoxin related protein.
  
  
 0.468
ASAC_1107
Predicted RNA-binding protein of the translin family.
       0.468
ASAC_0852
Pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase).
  
  
 0.439
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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