STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_1143Cation efflux protein CzrB. (273 aa)    
Predicted Functional Partners:
ASAC_0288
Putative L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
    0.799
rpl24e
50S ribosomal protein L24e; Binds to the 23S rRNA.
       0.653
ASAC_1144
Cytochrome bd quinol oxidase subunit.
       0.510
ASAC_1145
Cytochrome bd quinol oxidase subunit.
       0.510
ASAC_0578
Heavy metal translocating P-type ATPase.
  
 
 0.458
ASAC_0596
Predicted metal-dependent hydrolase of the TIM-barrel fold family.
 
     0.420
ASAC_1367
Alpha-mannosidase.
   
    0.412
ASAC_1355
Manganese transporter.
   
 
 0.406
ASAC_1425
NUDIX hydrolase.
 
   0.406
psmA
Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
  
    0.404
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.