Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_1281ABC transporter, putative. (251 aa)    
Predicted Functional Partners:
ASAC_1280
FeS assembly protein SufB.
 
 0.999
ASAC_1279
FeS assembly protein SufD.
 
 
 0.998
ASAC_0579
Putative aminotransferase.
  
  
 0.946
ASAC_0479
Phenylacetic acid degradation protein.
 
  
 0.645
ASAC_1282
Hypothetical protein.
       0.629
ASAC_0578
Heavy metal translocating P-type ATPase.
     
 0.592
ASAC_0175
Citrate transporter.
     
 0.465
ASAC_1283
Fe-S oxidoreductase.
       0.449
ASAC_0701
DUF74 domain containing protein; Belongs to the UPF0145 family.
  
  
 0.445
ASAC_0515
Predicted metal-dependent transcriptional regulator.
     
 0.422
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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