STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_1374ABC-2 type transporter. (278 aa)    
Predicted Functional Partners:
ASAC_1373
ABC transporter, ATP binding protein.
 
  
 0.932
ASAC_0825
Membrane bound alpha-amylase.
 
     0.575
ASAC_1412
ABC transporter, ATP binding protein.
 
  
 0.575
ASAC_0105
Permease, putative.
 
     0.563
ASAC_0705
ABC transporter, ATP binding protein.
 
   
 0.560
ASAC_1372
Endonuclease of RecB family.
       0.559
ASAC_0271
NatA-like ABC-type transport protein, ATPase component.
 
  
 0.553
ASAC_0689
Extracellular solute-binding protein, family 1.
  
     0.549
ASAC_0536
ABC-type multidrug transport system, ATPase component.
 
  
 0.542
ASAC_1421
Extracellular solute-binding protein, family 1.
  
     0.516
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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