STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_1378Beta-xylosidase. (743 aa)    
Predicted Functional Partners:
ASAC_1377
DUF99 domain containing protein; Belongs to the UPF0215 family.
       0.768
ASAC_1390
Beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
  
 0.654
ASAC_0772
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.648
ASAC_1341
N-acetylglucosamine-6-phosphate deacetylase.
  
  
 0.546
ASAC_1379
Hypothetical protein.
       0.516
ASAC_1074
Putative glycogen debranching enzyme.
 
  
 0.515
ASAC_1367
Alpha-mannosidase.
 
  
 0.480
ASAC_0471
Hypothetical protein.
  
    0.452
ASAC_1376
Hypothetical protein.
       0.444
ASAC_0983
Arabinose ABC transporter, permease.
  
  
 0.430
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.