STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_1385Sugar ABC-transporter, extracellular substrate-binding protein. (733 aa)    
Predicted Functional Partners:
ASAC_1384
Sugar ABC transporter, permease protein.
 
 
 0.943
ASAC_1383
Sugar ABC transporter, permease protein.
 
 
 0.936
ASAC_1382
Sugar ABC transporter, ATP-binding protein.
 
  
 0.786
ASAC_1381
Sugar ABC transporter, ATP-binding protein.
 
 
 0.729
ASAC_0061
Dipeptide/oligopeptide ABC transporter, permease protein.
 
 
 0.701
ASAC_0805
Dipeptide/oligopeptide ABC transporter, permease protein.
  
 
 0.659
ASAC_0806
Dipeptide/oligopeptide ABC transporter, permease protein.
  
 
 0.628
ASAC_0060
Dipeptide/oligopeptide ABC transporter, permease protein.
 
 
 0.627
ASAC_1386
Endo-beta 1,4-glucanase.
       0.528
ASAC_1380
Endo-beta1,4-glucanase.
       0.519
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.