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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_1406Maleate cis-trans isomerase, probable. (181 aa)    
Predicted Functional Partners:
ASAC_1442
Succinate:quinone oxidoreductase, cytochrome b subunit C.
  
  
  0.913
ASAC_1443
Succinate:quinone oxidoreductase, flavoprotein subunit A.
  
 
  0.911
ASAC_1440
Succinate:quinone oxidoreductase, iron-sulfur subunit B.
    
  0.903
ASAC_1441
Succinate:quinone oxidoreductase, hydrophobic anchor subunit D.
     
  0.900
ASAC_0147
Putative asparagine synthetase.
  
  
 0.831
ASAC_0828
Putative aspartate/alanine aminotransferase.
 
  
  0.827
ASAC_0616
Aspartate aminotransferase.
    
  0.802
ASAC_0803
Asparaginase.
     
  0.800
pyrI
Aspartate carbamoyltransferase regulatory chain; Involved in allosteric regulation of aspartate carbamoyltransferase.
     
  0.800
pyrB
Aspartate carbamoyltransferase.
     
  0.800
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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