Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ASAC_1409Putative ABC transporter subunit. (246 aa)    
Predicted Functional Partners:
ASAC_1408
Radical SAM domain protein.
 
   
 0.685
ASAC_1406
Maleate cis-trans isomerase, probable.
       0.560
ASAC_1407
Hypothetical protein.
       0.560
ASAC_1410
Regulatory protein, ArsR.
     
 0.524
ASAC_0318
Hypothetical protein; Involved in DNA damage repair.
       0.410
ASAC_1405
Hypothetical protein; Belongs to the UPF0282 family.
       0.401
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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