STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_1435L-carnitine dehydratase/bile acid-inducible protein F. (389 aa)    
Predicted Functional Partners:
ASAC_1436
Citryl-CoA lyase beta subunit-like protein.
 
  
 0.988
ASAC_1433
Enoyl-CoA hydratase.
  
  
 0.715
ASAC_1434
Hypothetical protein.
       0.645
ASAC_1437
Permease, sugar transport protein, putative.
       0.533
ASAC_0582
Acyl-CoA dehydrogenase.
 
 
 0.487
ASAC_0155
Acyl-CoA dehydrogenase.
 
 
 0.480
ASAC_1042
Acyl-CoA dehydrogenase.
 
 
 0.470
ASAC_1232
Acyl-CoA dehydrogenase.
  
 
 0.470
ASAC_1031
3-Hydroxyacyl-CoA dehydrogenase.
    
 0.463
ASAC_0119
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 0.444
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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