Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_1453Metabolite permease, putative. (490 aa)    
Predicted Functional Partners:
ASAC_1454
Hypothetical protein.
     
 0.778
ASAC_1450
Metabolite transporter.
 
  
 0.660
ASAC_1452
Probable leucine aminopeptidase.
  
  
 0.585
ASAC_1067
Pur operon repressor-like protein.
  
  
 0.564
ASAC_1117
Hypothetical protein.
  
  
 0.564
ASAC_1456
Flavin reductase-like, FMN-binding protein.
       0.479
ASAC_1455
Hypothetical protein.
       0.467
ASAC_1451
Aminotransferase, class-V.
  
  
 0.450
ASAC_0979
Permease for cytosine/purines uracil thiamine allantoin.
 
  
 0.416
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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