Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
albA-2DNA/RNA-binding protein Alba 1; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. (108 aa)    
Predicted Functional Partners:
ASAC_1245
Hypothetical protein.
    
   0.838
ASAC_1475
Hypothetical protein.
       0.660
ASAC_1476
Hypothetical protein.
       0.660
ASAC_1477
ABC transporter related protein.
       0.660
ASAC_1377
DUF99 domain containing protein; Belongs to the UPF0215 family.
 
     0.585
creN7
Hypothetical protein; A probable chromatin protein, binds double-strand DNA without sequence specificity. Constrains negative DNA supercoils. Belongs to the Cren7 family.
     
 0.571
ASAC_0509
Hypothetical protein; Belongs to the UPF0147 family.
  
     0.503
ASAC_1478
Putative oxidoreductase.
       0.481
adkA
Adenylate kinase; Belongs to the archaeal adenylate kinase family.
  
     0.473
ASAC_0161
Transporter.
 
     0.472
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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