Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ASAC_0161 | albA-2 | ASAC_0161 | ASAC_1474 | Transporter. | DNA/RNA-binding protein Alba 1; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.471 |
| ASAC_0290 | ASAC_1377 | ASAC_0290 | ASAC_1377 | Putative HTH-type transcriptional regulator. | DUF99 domain containing protein; Belongs to the UPF0215 family. | 0.465 |
| ASAC_0290 | albA-2 | ASAC_0290 | ASAC_1474 | Putative HTH-type transcriptional regulator. | DNA/RNA-binding protein Alba 1; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.448 |
| ASAC_0509 | albA-2 | ASAC_0509 | ASAC_1474 | Hypothetical protein; Belongs to the UPF0147 family. | DNA/RNA-binding protein Alba 1; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.503 |
| ASAC_1245 | albA-2 | ASAC_1245 | ASAC_1474 | Hypothetical protein. | DNA/RNA-binding protein Alba 1; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.877 |
| ASAC_1377 | ASAC_0290 | ASAC_1377 | ASAC_0290 | DUF99 domain containing protein; Belongs to the UPF0215 family. | Putative HTH-type transcriptional regulator. | 0.465 |
| ASAC_1377 | albA-2 | ASAC_1377 | ASAC_1474 | DUF99 domain containing protein; Belongs to the UPF0215 family. | DNA/RNA-binding protein Alba 1; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.584 |
| ASAC_1475 | ASAC_1476 | ASAC_1475 | ASAC_1476 | Hypothetical protein. | Hypothetical protein. | 0.801 |
| ASAC_1475 | ASAC_1477 | ASAC_1475 | ASAC_1477 | Hypothetical protein. | ABC transporter related protein. | 0.801 |
| ASAC_1475 | ASAC_1478 | ASAC_1475 | ASAC_1478 | Hypothetical protein. | Putative oxidoreductase. | 0.569 |
| ASAC_1475 | albA-2 | ASAC_1475 | ASAC_1474 | Hypothetical protein. | DNA/RNA-binding protein Alba 1; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.661 |
| ASAC_1476 | ASAC_1475 | ASAC_1476 | ASAC_1475 | Hypothetical protein. | Hypothetical protein. | 0.801 |
| ASAC_1476 | ASAC_1477 | ASAC_1476 | ASAC_1477 | Hypothetical protein. | ABC transporter related protein. | 0.802 |
| ASAC_1476 | ASAC_1478 | ASAC_1476 | ASAC_1478 | Hypothetical protein. | Putative oxidoreductase. | 0.569 |
| ASAC_1476 | albA-2 | ASAC_1476 | ASAC_1474 | Hypothetical protein. | DNA/RNA-binding protein Alba 1; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.661 |
| ASAC_1477 | ASAC_1475 | ASAC_1477 | ASAC_1475 | ABC transporter related protein. | Hypothetical protein. | 0.801 |
| ASAC_1477 | ASAC_1476 | ASAC_1477 | ASAC_1476 | ABC transporter related protein. | Hypothetical protein. | 0.802 |
| ASAC_1477 | ASAC_1478 | ASAC_1477 | ASAC_1478 | ABC transporter related protein. | Putative oxidoreductase. | 0.658 |
| ASAC_1477 | albA-2 | ASAC_1477 | ASAC_1474 | ABC transporter related protein. | DNA/RNA-binding protein Alba 1; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.661 |
| ASAC_1478 | ASAC_1475 | ASAC_1478 | ASAC_1475 | Putative oxidoreductase. | Hypothetical protein. | 0.569 |
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