STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_1478Putative oxidoreductase. (254 aa)    
Predicted Functional Partners:
ASAC_0651
Sulfatase.
  
 
 0.787
ASAC_0958
DNA double-strand break repair protein mre11.
 
 
 0.683
ASAC_1477
ABC transporter related protein.
  
 
 0.658
ASAC_1491
Hypothetical protein.
  
 
 0.647
ASAC_0383
NADH-quinone oxidoreductase subunit A; NuoA - like protein.
   
 
 0.575
gatA
Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
  
 
 0.573
ASAC_0797
Glutamyl-tRNA amidotransferase, subunit A.
  
 
 0.573
ASAC_1475
Hypothetical protein.
       0.569
ASAC_1476
Hypothetical protein.
       0.569
ASAC_0373
NADH dehydrogenase subunit N; NuoN and MbxH - like protein.
  
 
 0.561
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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