STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M301_0146PFAM: Type II secretion system F domain; KEGG: mmb:Mmol_0245 type II secretion system protein. (401 aa)    
Predicted Functional Partners:
M301_0145
PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mmb:Mmol_0244 type II secretion system protein E.
 
   0.975
M301_0603
KEGG: mmb:Mmol_0595 type IV-A pilus assembly ATPase PilB; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein.
  
   0.886
M301_0632
KEGG: mmb:Mmol_0619 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase.
  
   0.886
M301_0726
PFAM: type II secretion system protein E; KEGG: mfa:Mfla_2419 type II secretion system protein E.
  
   0.886
M301_1283
KEGG: mmb:Mmol_1192 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase.
  
   0.886
M301_1719
PFAM: type II secretion system protein E; KEGG: tbd:Tbd_1295 type II secretion system protein.
  
   0.886
M301_0461
PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: tbd:Tbd_1295 type II secretion system protein.
  
   0.885
M301_0151
KEGG: mmb:Mmol_0250 hypothetical protein.
 
    0.868
M301_0147
KEGG: mmb:Mmol_0246 hypothetical protein.
 
     0.822
M301_0527
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.808
Your Current Organism:
Methylotenera versatilis 301
NCBI taxonomy Id: 666681
Other names: M. versatilis 301, Methylotenera sp. 301, Methylotenera versatilis str. 301, Methylotenera versatilis strain 301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.