Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
M301_1237Hypothetical protein; KEGG: sfv:SFV_2091 O-antigen polymerase. (420 aa)    
Predicted Functional Partners:
M301_1236
KEGG: mmb:Mmol_1035 rhamnosyltransferase; TIGRFAM: rhamnosyltransferase; PFAM: glycosyl transferase family 2.
       0.773
M301_1238
PFAM: glycosyl transferase family 2; KEGG: mmb:Mmol_1036 glycosyl transferase family 2.
       0.773
M301_1235
PFAM: Methyltransferase type 11; KEGG: gme:Gmet_2177 methylase involved in ubiquinone/menaquinone biosynthesis-like.
       0.664
M301_1234
PFAM: polysaccharide biosynthesis protein; KEGG: pna:Pnap_3487 polysaccharide biosynthesis protein.
       0.660
M301_1239
PFAM: NAD-dependent epimerase/dehydratase; KEGG: dar:Daro_1706 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase.
       0.450
M301_1240
PFAM: amine oxidase; KEGG: dar:Daro_1705 hypothetical protein.
       0.450
M301_1241
PFAM: GtrA family protein; KEGG: rso:RSc0167 hypothetical protein.
       0.450
Your Current Organism:
Methylotenera versatilis 301
NCBI taxonomy Id: 666681
Other names: M. versatilis 301, Methylotenera sp. 301, Methylotenera versatilis str. 301, Methylotenera versatilis strain 301
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