node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
M301_1669 | M301_1670 | M301_1669 | M301_1670 | KEGG: mmb:Mmol_1413 hypothetical protein. | KEGG: mmb:Mmol_1414 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | 0.710 |
M301_1670 | M301_1669 | M301_1670 | M301_1669 | KEGG: mmb:Mmol_1414 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | KEGG: mmb:Mmol_1413 hypothetical protein. | 0.710 |
M301_1670 | rplC | M301_1670 | M301_0336 | KEGG: mmb:Mmol_1414 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.596 |
M301_1670 | rplD | M301_1670 | M301_0337 | KEGG: mmb:Mmol_1414 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.608 |
M301_1670 | rplM | M301_1670 | M301_0092 | KEGG: mmb:Mmol_1414 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.598 |
M301_1670 | rplU | M301_1670 | M301_0530 | KEGG: mmb:Mmol_1414 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.610 |
M301_1670 | rpmD | M301_1670 | M301_0354 | KEGG: mmb:Mmol_1414 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | KEGG: mmb:Mmol_0363 ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30. | 0.587 |
M301_1670 | rpmF | M301_1670 | M301_1333 | KEGG: mmb:Mmol_1414 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | KEGG: mmb:Mmol_1147 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.587 |
M301_1670 | rpmH | M301_1670 | M301_2801 | KEGG: mmb:Mmol_1414 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | KEGG: mmb:Mmol_2349 ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.590 |
M301_1670 | rpsC | M301_1670 | M301_0342 | KEGG: mmb:Mmol_1414 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.603 |
M301_1670 | rpsO | M301_1670 | M301_0123 | KEGG: mmb:Mmol_1414 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.603 |
rplC | M301_1670 | M301_0336 | M301_1670 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | KEGG: mmb:Mmol_1414 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | 0.596 |
rplC | rplD | M301_0336 | M301_0337 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.999 |
rplC | rplM | M301_0336 | M301_0092 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplC | rplU | M301_0336 | M301_0530 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.996 |
rplC | rpmD | M301_0336 | M301_0354 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | KEGG: mmb:Mmol_0363 ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30. | 0.999 |
rplC | rpmF | M301_0336 | M301_1333 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | KEGG: mmb:Mmol_1147 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.987 |
rplC | rpmH | M301_0336 | M301_2801 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | KEGG: mmb:Mmol_2349 ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.968 |
rplC | rpsC | M301_0336 | M301_0342 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rplC | rpsO | M301_0336 | M301_0123 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.996 |