STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M301_1719PFAM: type II secretion system protein E; KEGG: tbd:Tbd_1295 type II secretion system protein. (562 aa)    
Predicted Functional Partners:
M301_1718
PFAM: Type II secretion system F domain; KEGG: net:Neut_0507 type II secretion system protein.
 
   0.973
M301_0725
PFAM: Type II secretion system F domain; KEGG: tbd:Tbd_1294 type II secretion system protein F.
 
   0.888
M301_0146
PFAM: Type II secretion system F domain; KEGG: mmb:Mmol_0245 type II secretion system protein.
  
   0.886
M301_0460
PFAM: Type II secretion system F domain; KEGG: tbd:Tbd_1294 type II secretion system protein F.
  
   0.886
M301_1282
PFAM: Type II secretion system F domain; KEGG: mmb:Mmol_1193 type II secretion system protein.
  
   0.885
M301_0602
PFAM: Type II secretion system F domain; KEGG: mmb:Mmol_0594 type II secretion system protein.
  
   0.881
M301_1717
KEGG: mei:Msip34_0847 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G.
 
 
 0.868
M301_1723
PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: mfa:Mfla_2414 type II and III secretion system protein.
 
  
 0.809
M301_1724
KEGG: neu:NE1603 putative general secretion pathway GspG related transmembrane protein.
 
   0.807
M301_1726
KEGG: nmu:Nmul_A2580 hypothetical protein.
 
   0.807
Your Current Organism:
Methylotenera versatilis 301
NCBI taxonomy Id: 666681
Other names: M. versatilis 301, Methylotenera sp. 301, Methylotenera versatilis str. 301, Methylotenera versatilis strain 301
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.