STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M301_2354PFAM: protein of unknown function DUF1555; KEGG: cyc:PCC7424_3228 hypothetical protein. (198 aa)    
Predicted Functional Partners:
M301_1871
PFAM: protein of unknown function DUF1555; KEGG: npu:Npun_F1424 putative outer membrane adhesin like proteiin.
  
  
 0.600
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
 
 0.549
M301_2284
Surfeit locus 1; KEGG: mmb:Mmol_0549 surfeit locus 1.
    
   0.538
M301_1571
KEGG: mmb:Mmol_1435 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase.
  
 
 0.527
M301_0252
KEGG: mmb:Mmol_2221 hypothetical protein.
  
 
 0.516
M301_0253
KEGG: mmb:Mmol_2268 hypothetical protein.
  
 
 0.516
M301_0556
KEGG: mmb:Mmol_0538 putative signal peptide protein.
  
 
 0.516
M301_0972
PFAM: Collagen triple helix repeat; KEGG: pna:Pnap_3992 triple helix repeat-containing collagen.
  
 
 0.516
M301_1274
KEGG: mmb:Mmol_1202 hypothetical protein.
  
 
 0.516
M301_2615
KEGG: mmb:Mmol_2268 hypothetical protein.
  
 
 0.516
Your Current Organism:
Methylotenera versatilis 301
NCBI taxonomy Id: 666681
Other names: M. versatilis 301, Methylotenera sp. 301, Methylotenera versatilis str. 301, Methylotenera versatilis strain 301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.