node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGG87905.1 | AGG87906.1 | R2APBS1_0738 | R2APBS1_0739 | PFAM: Protein of unknown function (DUF3501). | Fe-S oxidoreductase. | 0.983 |
AGG87905.1 | rplJ | R2APBS1_0738 | R2APBS1_0969 | PFAM: Protein of unknown function (DUF3501). | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.932 |
AGG87905.1 | rplN | R2APBS1_0738 | R2APBS1_0988 | PFAM: Protein of unknown function (DUF3501). | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.932 |
AGG87905.1 | rplV | R2APBS1_0738 | R2APBS1_0983 | PFAM: Protein of unknown function (DUF3501). | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.932 |
AGG87905.1 | rpsC | R2APBS1_0738 | R2APBS1_0984 | PFAM: Protein of unknown function (DUF3501). | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.932 |
AGG87905.1 | rpsG | R2APBS1_0738 | R2APBS1_0974 | PFAM: Protein of unknown function (DUF3501). | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.932 |
AGG87905.1 | rpsJ | R2APBS1_0738 | R2APBS1_0977 | PFAM: Protein of unknown function (DUF3501). | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.932 |
AGG87905.1 | rpsL | R2APBS1_0738 | R2APBS1_0973 | PFAM: Protein of unknown function (DUF3501). | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.932 |
AGG87905.1 | rpsQ | R2APBS1_0738 | R2APBS1_0987 | PFAM: Protein of unknown function (DUF3501). | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.932 |
AGG87905.1 | rpsS | R2APBS1_0738 | R2APBS1_0982 | PFAM: Protein of unknown function (DUF3501). | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.932 |
AGG87906.1 | AGG87905.1 | R2APBS1_0739 | R2APBS1_0738 | Fe-S oxidoreductase. | PFAM: Protein of unknown function (DUF3501). | 0.983 |
rplJ | AGG87905.1 | R2APBS1_0969 | R2APBS1_0738 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | PFAM: Protein of unknown function (DUF3501). | 0.932 |
rplJ | rplN | R2APBS1_0969 | R2APBS1_0988 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.996 |
rplJ | rplV | R2APBS1_0969 | R2APBS1_0983 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.998 |
rplJ | rpsC | R2APBS1_0969 | R2APBS1_0984 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.994 |
rplJ | rpsG | R2APBS1_0969 | R2APBS1_0974 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.996 |
rplJ | rpsJ | R2APBS1_0969 | R2APBS1_0977 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.994 |
rplJ | rpsL | R2APBS1_0969 | R2APBS1_0973 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.995 |
rplJ | rpsQ | R2APBS1_0969 | R2APBS1_0987 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.995 |
rplJ | rpsS | R2APBS1_0969 | R2APBS1_0982 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.994 |