STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGG88884.1PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. (652 aa)    
Predicted Functional Partners:
AGG88885.1
Putative Fe-S protein; PFAM: Protein of unknown function (DUF1289); manually curated.
       0.773
AGG88883.1
Hypothetical protein; PFAM: Uncharacterised BCR, COG1937.
  
  
 0.690
AGG88874.1
Copper/silver-translocating P-type ATPase; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
 
  
0.543
AGG88886.1
Hypothetical protein.
       0.503
AGG88882.1
Hypothetical protein.
       0.495
merA-2
Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 
 0.487
AGG89218.1
Mercuric reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Heavy-metal-associated domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mercuric reductase.
  
 
 0.487
merA-3
Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 
 0.487
AGG88857.1
Copper chaperone; PFAM: Heavy-metal-associated domain.
  
 
 0.427
AGG88875.1
Copper chaperone; PFAM: Heavy-metal-associated domain; manually curated.
  
 
 0.427
Your Current Organism:
Rhodanobacter denitrificans
NCBI taxonomy Id: 666685
Other names: DSM 23569, JCM 17641, R. denitrificans, Rhodanobacter denitrificans Prakash et al. 2012, Rhodanobacter sp. 116-2, Rhodanobacter sp. 2APBS1, Rhodanobacter sp. FW104-R3, strain 2APBS1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.