STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK51931.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
AGK54691.1
Sporulation protein YpjB.
  
     0.764
AGK52449.1
Hypothetical protein.
  
     0.761
AGK54935.1
Hypothetical protein.
  
     0.752
AGK54936.1
Hypothetical protein.
  
     0.746
AGK53158.1
Sporulation protein SirA.
  
     0.741
AGK52956.1
Hypothetical protein.
  
     0.732
AGK52955.1
Hypothetical protein.
  
     0.728
AGK55069.1
Sporulation initiation phosphotransferase B; COG0642 Signal transduction histidine kinase.
  
     0.714
AGK55162.1
Sporulation protein YtxC.
  
     0.699
AGK52923.1
Hypothetical protein.
  
     0.693
Your Current Organism:
Bacillus sp. 1NLA3E
NCBI taxonomy Id: 666686
Other names: B. sp. 1NLA3E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.