STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK53349.1Sirohydrochlorin ferrochelatase. (243 aa)    
Predicted Functional Partners:
AGK53813.1
COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain).
  
 
 0.976
AGK52165.1
precorrin-8X methylmutase CbiC; COG2082 Precorrin isomerase.
   
 0.958
AGK52162.1
Cobalamin (vitamin B12) biosynthesis CbiX protein.
  
  
 
0.910
AGK52161.1
COG1010 Precorrin-3B methylase.
 
  
 0.860
AGK52167.1
CbiET protein; COG2241 Precorrin-6B methylase 1.
 
   
 0.858
AGK52174.1
uroporphyrin-III C-methyltransferase; COG0007 Uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family.
  
 0.852
cbiD
cobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
   
 0.780
AGK52170.1
COG2073 Cobalamin biosynthesis protein CbiG.
 
   
 0.775
AGK53812.1
COG0007 Uroporphyrinogen-III methylase.
  
 0.769
AGK52168.1
COG2243 Precorrin-2 methylase; Belongs to the precorrin methyltransferase family.
 
   
 0.757
Your Current Organism:
Bacillus sp. 1NLA3E
NCBI taxonomy Id: 666686
Other names: B. sp. 1NLA3E
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