Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGK53921.1 | AGK53922.1 | B1NLA3E_10835 | B1NLA3E_10840 | Cell wall hydrolase SleB; COG1388 FOG: LysM repeat. | Glycoside hydrolase family protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | 0.609 |
AGK53922.1 | AGK53921.1 | B1NLA3E_10840 | B1NLA3E_10835 | Glycoside hydrolase family protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | Cell wall hydrolase SleB; COG1388 FOG: LysM repeat. | 0.609 |
AGK53922.1 | AGK53923.1 | B1NLA3E_10840 | B1NLA3E_10845 | Glycoside hydrolase family protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | Hypothetical protein. | 0.416 |
AGK53922.1 | AGK54005.1 | B1NLA3E_10840 | B1NLA3E_11265 | Glycoside hydrolase family protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | Hypothetical protein. | 0.441 |
AGK53922.1 | AGK55710.1 | B1NLA3E_10840 | B1NLA3E_19830 | Glycoside hydrolase family protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | Hypothetical protein; COG3291 FOG: PKD repeat. | 0.418 |
AGK53923.1 | AGK53922.1 | B1NLA3E_10845 | B1NLA3E_10840 | Hypothetical protein. | Glycoside hydrolase family protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | 0.416 |
AGK54005.1 | AGK53922.1 | B1NLA3E_11265 | B1NLA3E_10840 | Hypothetical protein. | Glycoside hydrolase family protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | 0.441 |
AGK55710.1 | AGK53922.1 | B1NLA3E_19830 | B1NLA3E_10840 | Hypothetical protein; COG3291 FOG: PKD repeat. | Glycoside hydrolase family protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | 0.418 |