Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGK54450.1 | AGK54451.1 | B1NLA3E_13510 | B1NLA3E_13515 | Phosphinothricin N-acetyltransferase; COG1247 Sortase and related acyltransferases. | Thioredoxin; COG3531 Predicted protein-disulfide isomerase. | 0.504 |
AGK54450.1 | AGK54452.1 | B1NLA3E_13510 | B1NLA3E_13520 | Phosphinothricin N-acetyltransferase; COG1247 Sortase and related acyltransferases. | Oxidoreductase; COG2910 Putative NADH-flavin reductase. | 0.400 |
AGK54451.1 | AGK54450.1 | B1NLA3E_13515 | B1NLA3E_13510 | Thioredoxin; COG3531 Predicted protein-disulfide isomerase. | Phosphinothricin N-acetyltransferase; COG1247 Sortase and related acyltransferases. | 0.504 |
AGK54451.1 | AGK54452.1 | B1NLA3E_13515 | B1NLA3E_13520 | Thioredoxin; COG3531 Predicted protein-disulfide isomerase. | Oxidoreductase; COG2910 Putative NADH-flavin reductase. | 0.624 |
AGK54452.1 | AGK54450.1 | B1NLA3E_13520 | B1NLA3E_13510 | Oxidoreductase; COG2910 Putative NADH-flavin reductase. | Phosphinothricin N-acetyltransferase; COG1247 Sortase and related acyltransferases. | 0.400 |
AGK54452.1 | AGK54451.1 | B1NLA3E_13520 | B1NLA3E_13515 | Oxidoreductase; COG2910 Putative NADH-flavin reductase. | Thioredoxin; COG3531 Predicted protein-disulfide isomerase. | 0.624 |