STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK55050.1Hypothetical protein. (98 aa)    
Predicted Functional Partners:
AGK55114.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.744
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
    0.737
AGK54882.1
Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG.
  
     0.726
AGK55012.1
Hypothetical protein.
  
     0.724
AGK52756.1
Hypothetical protein.
  
     0.719
secF
Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
 
    0.719
AGK52539.1
Hypothetical protein.
  
     0.717
hpr
Transcriptional regulator Hpr; Negative regulator of protease production and sporulation.
  
     0.691
AGK56033.1
ATP synthase protein I.
  
    0.672
AGK55630.1
COG4897 Uncharacterized protein conserved in bacteria.
  
     0.664
Your Current Organism:
Bacillus sp. 1NLA3E
NCBI taxonomy Id: 666686
Other names: B. sp. 1NLA3E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.