STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK55162.1Sporulation protein YtxC. (309 aa)    
Predicted Functional Partners:
AGK52956.1
Hypothetical protein.
  
     0.752
AGK55479.1
Spore coat protein YutH.
  
    0.752
AGK54719.1
Hypothetical protein.
  
     0.751
AGK52955.1
Hypothetical protein.
  
     0.747
AGK55245.1
Hypothetical protein.
  
     0.744
AGK54936.1
Hypothetical protein.
  
     0.734
AGK52253.1
Hypothetical protein.
  
     0.731
AGK54844.1
Stage III sporulation protein AF.
  
     0.726
AGK54864.1
Hypothetical protein.
  
     0.718
AGK54848.1
Stage III sporulation protein SpoAB.
  
     0.709
Your Current Organism:
Bacillus sp. 1NLA3E
NCBI taxonomy Id: 666686
Other names: B. sp. 1NLA3E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.