STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK55282.1COG1138 Cytochrome c biogenesis factor. (665 aa)    
Predicted Functional Partners:
AGK55281.1
Hypothetical protein; Possible subunit of a heme lyase.
  
  
 0.891
AGK54859.1
Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
 
 
 0.877
AGK54857.1
Hypothetical protein; Possible subunit of a heme lyase.
 
  
 0.871
AGK54853.1
COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component.
 
  
 0.832
AGK54852.1
COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component.
 
  
 0.823
AGK55279.1
Alkyl hydroperoxide reductase; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
     0.762
AGK54698.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
 0.756
AGK55277.1
COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit; Belongs to the cytochrome c-552 family.
 
  
 0.753
AGK55278.1
COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit.
 
    0.727
AGK55280.1
Hypothetical protein.
       0.677
Your Current Organism:
Bacillus sp. 1NLA3E
NCBI taxonomy Id: 666686
Other names: B. sp. 1NLA3E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.