STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM9Uncharacterized protein RBM9. (555 aa)    
Predicted Functional Partners:
E9I7L4_DAPPU
RRM domain-containing protein.
  
 
 0.843
E9H2C7_DAPPU
RRM domain-containing protein.
  
 
 0.842
E9H6Z0_DAPPU
RRM domain-containing protein.
  
 
 0.821
E9I341_DAPPU
RRM domain-containing protein.
  
 
 0.805
E9HLV2_DAPPU
KH domain-containing protein.
   
 
 0.769
E9GJB3_DAPPU
Uncharacterized protein.
   
 
 0.667
E9GLL1_DAPPU
Uncharacterized protein.
      
 0.597
E9H1S8_DAPPU
Uncharacterized protein.
  
 
 
 0.579
E9FUT5_DAPPU
Uncharacterized protein.
      
 0.555
E9HGN9_DAPPU
RRM domain-containing protein.
  
   
 0.513
Your Current Organism:
Daphnia pulex
NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.