STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E9G3N0_DAPPUCarn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (644 aa)    
Predicted Functional Partners:
E9H3E8_DAPPU
Uncharacterized protein.
     
 0.925
E9FT86_DAPPU
Uncharacterized protein.
 
   
  0.900
E9G046_DAPPU
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.869
E9H8Z2_DAPPU
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.818
E9FUQ6_DAPPU
Uncharacterized protein.
   
 0.801
E9GYY1_DAPPU
Uncharacterized protein.
   
 0.801
E9HNJ1_DAPPU
SCP2 domain-containing protein.
   
 0.801
E9FYH6_DAPPU
TPR_REGION domain-containing protein.
    
 0.764
E9G3N1_DAPPU
MFS domain-containing protein.
 
 
  
 0.692
E9FRE7_DAPPU
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.666
Your Current Organism:
Daphnia pulex
NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.