E9G3W7_DAPPU protein (Daphnia pulex) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

E9G3W7_DAPPU

Uncharacterized protein. (359 aa)

Predicted Functional Partners:

E9FSH9_DAPPU

0.923

E9H2A9_DAPPU

0.920

E9FYV4_DAPPU

0.626

E9G3X0_DAPPU

0.616

E9G3X1_DAPPU

0.613

E9G3X2_DAPPU

0.612

E9G3W8_DAPPU

0.608

E9G3W9_DAPPU

0.607

E9FY40_DAPPU

0.431

E9GAB2_DAPPU

0.408

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E9FSH9_DAPPU	E9FYV4_DAPPU	E9FSH9	E9FYV4	Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.923
E9FSH9_DAPPU	E9G3W7_DAPPU	E9FSH9	E9G3W7	Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.	Uncharacterized protein.	0.923
E9FSH9_DAPPU	E9G3W8_DAPPU	E9FSH9	E9G3W8	Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.923
E9FSH9_DAPPU	E9G3W9_DAPPU	E9FSH9	E9G3W9	Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.	Uncharacterized protein.	0.923
E9FSH9_DAPPU	E9G3X0_DAPPU	E9FSH9	E9G3X0	Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.919
E9FSH9_DAPPU	E9G3X1_DAPPU	E9FSH9	E9G3X1	Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.919
E9FSH9_DAPPU	E9G3X2_DAPPU	E9FSH9	E9G3X2	Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.	Uncharacterized protein.	0.919
E9FSH9_DAPPU	E9H2A9_DAPPU	E9FSH9	E9H2A9	Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.	Pyruvate carboxyltransferase domain-containing protein.	0.976
E9FY40_DAPPU	E9FYV4_DAPPU	E9FY40	E9FYV4	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.430
E9FY40_DAPPU	E9G3W7_DAPPU	E9FY40	E9G3W7	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.431
E9FY40_DAPPU	E9G3W8_DAPPU	E9FY40	E9G3W8	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.505
E9FY40_DAPPU	E9G3W9_DAPPU	E9FY40	E9G3W9	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.438
E9FY40_DAPPU	E9G3X1_DAPPU	E9FY40	E9G3X1	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.411
E9FY40_DAPPU	E9G3X2_DAPPU	E9FY40	E9G3X2	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.405
E9FYV4_DAPPU	E9FSH9_DAPPU	E9FYV4	E9FSH9	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.	0.923
E9FYV4_DAPPU	E9FY40_DAPPU	E9FYV4	E9FY40	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.430
E9FYV4_DAPPU	E9G3W7_DAPPU	E9FYV4	E9G3W7	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.626
E9FYV4_DAPPU	E9G3W8_DAPPU	E9FYV4	E9G3W8	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.617
E9FYV4_DAPPU	E9G3W9_DAPPU	E9FYV4	E9G3W9	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.626
E9FYV4_DAPPU	E9G3X0_DAPPU	E9FYV4	E9G3X0	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.624